Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015881156.1_cds_XP_016437674.1_33407
CDS Infomation

[gene=LOC107763693] [db_xref=GeneID:107763693] [protein=copper methylamine oxidase-like isoform X3] [protein_id=XP_016437674.1] [location=join(52971..53142,54072..54181,54319..54624,55421..55533,55626..55956,56043..56303,57071..57256,57365..57505,58447..58715,58907..58988,59851..59988)] [gbkey=CDS]
Sequence

ATGGCCGCAACTTTGCACAAGGTGACTCCGACTACTGCTTCGGCCTCCGCTTCTATCGCC
CGTCGTGAGTCCGCCGCAGCCTCCGTCCTGGTGGACGATCAGCAGAAACAAACGCCGGCT
CTGACGTCATTGCTTAACTCTCAACCTCCTTCCTCCAATCCCTCTAGCAAAGGGAAACAA
ATCATGCCAAGAGCTCATACATGCCATCCTTTGGACCCTTTATCTGCTGCTGAAATCTCT
GTGGCTGTGGCGACCGTCAGAGCTGCCGGTGAAACACCCGAGGTCAGAGATGGCATGCGC
TTTATTGAGGTGGTTCTTCTGGAACCTGATAAAAGTGTCGTTGCACTGGCTGATGCCTAT
TTCTTCCCACCTTTCCAATCTTCATTGATGTCCAGAAGGAAAGGAGGGCTTCCCATTCCT
ACTAAGCTTCCTCCAAGGCGAGCTAGACTTATTGCATATAATAAGAAAACAAATGAGACA
AGCATATGGATTGTTGAGCTAGCTGAAGTACATGCTGCTGCTCGAGGTGGACATCACAAG
GGAAAAGTGATTTCATCCAATGTTGTTCCAGATGTTCAGCCACCTATAGATGCACAAGAG
TATGCTGACTGTGAAGCTGTAGTTAAAAATTATCCTCCTTTTAGGGAAGCAATGAAGAGA
AGGGGTATTGATGACATGGATGTTGTGATGGTGGACCCCTGGTGCGTTGGTTATCACAGT
GAGGCTGATGCTCCTAGCCGCAGGCTTGCCAAACCGCTAGTATTCTGCAGAACAGAGAGT
GACTGCCCAATGGAAAATGGATATGCAAGACCGGTTGAAGGAATATATGCCCTTGTTGAT
GTGCAAAACATGCAGGTGATAGAGTTTGAAGACCGCAAACTTGTACCTTTACCTCCAGCT
GATCCACTGAGGAATTACACTGCTGGTGAGACAAGAGGAGGGGTCGATCGAAGTGATGTA
AAACCCCTCCAGATTATTCAGCCAGAGGGTCCAAGCTTTCGAGTCAATGGGAACTATGTG
GAATGGCAAAAGTGGAACTTCCGAGTAGGTTTCACCCCTAGGGAGGGTTTGGTTATACAC
TCTGTGGCATATCTTGACGGTAGCAGGGGTCGGAGACCCATAGCCCATAGGTTGAGTTTT
GTGGAGATGGTTGTCCCCTATGGGGATCCAAATGACCCACATTACAGAAAGAACGCTTTT
GATGCAGGAGAAGATGGGCTCGGAAAGAATGCTCATTCACTTAAGAGGGTAACTGACATT
TCTCCGGTTCAACTATGGATGACTTTTGAGAATGATGGGAAAATTGAAGCAGAAGTCAAA
CTCACAGGAATTCTCAGTTTGGGAGCATTGCCCCCCGGAGAGTCTCGTAAATATGGCACC
ACAATAGCACCAGGATTGTATGCACCTGTTCATCAACACTTCTTTGTTGCTCGTATGAAT
ATGGCAGTTGATTGTAAACCAGGAGAAGCACACAATCAGGTTGTTGAAGTTAATGTAAGA
GTTGAAGAACCTGGGAAAGAAAATGTTCACAACAATGCGTTCTATGCTAAGGAAACAGTG
CTTACGTCTGAATTGCAAGCAATGCGGGACTGTGATACTTTATCTGCTCGTCATTGGATT
GTTAGGAACACAAGAACATCCAATAGAACAGGACAGCTAACAGGGTACAAGCTGGTACCT
GGCCCTAGCTGTTTGCCATTAGCTGGTCCTGAGGCTAAGTTTTTGAGAAGAGCTGCATTT
TTGAAGCACAATCTATGGGTTACACAATATGCACCCGGAGAAGATTTTCCAGGGGGAGAG
TTCCCTAATCAAAATCCACGTGTTGGTGAGGGATTAGCTTCTTGGGTTAAGCAAGATCGT
TCTCTGGAAGAAAGTGATGTTGTTCTCTGGTATGTTTTTGGAATCACACATGTTCCTCGG
TTGGAGGACTGGCCTGTTATGCCAGTTGAACATATCGGTTTTATGCTTCAGCCGCATGGA
TTCTTTAACTGCTCTCCTGCTGTAGATGTACCTCCTCCTCGGGGATGTGACTTGGAAATC
AAAGACAGTGATGGTTCAGAAAATGGTGTAGCAAAGCCCACTCCCAGTAGTTTGATGGCC
AAGCTTTGA

Peptide Sequence

PEP ID

XP_016437674.1
PEP Infomation

PREDICTED: copper methylamine oxidase-like isoform X3 [Nicotiana tabacum]
Sequence

MAATLHKVTPTTASASASIARRESAAASVLVDDQQKQTPALTSLLNSQPPSSNPSSKGKQ
IMPRAHTCHPLDPLSAAEISVAVATVRAAGETPEVRDGMRFIEVVLLEPDKSVVALADAY
FFPPFQSSLMSRRKGGLPIPTKLPPRRARLIAYNKKTNETSIWIVELAEVHAAARGGHHK
GKVISSNVVPDVQPPIDAQEYADCEAVVKNYPPFREAMKRRGIDDMDVVMVDPWCVGYHS
EADAPSRRLAKPLVFCRTESDCPMENGYARPVEGIYALVDVQNMQVIEFEDRKLVPLPPA
DPLRNYTAGETRGGVDRSDVKPLQIIQPEGPSFRVNGNYVEWQKWNFRVGFTPREGLVIH
SVAYLDGSRGRRPIAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKRVTDI
SPVQLWMTFENDGKIEAEVKLTGILSLGALPPGESRKYGTTIAPGLYAPVHQHFFVARMN
MAVDCKPGEAHNQVVEVNVRVEEPGKENVHNNAFYAKETVLTSELQAMRDCDTLSARHWI
VRNTRTSNRTGQLTGYKLVPGPSCLPLAGPEAKFLRRAAFLKHNLWVTQYAPGEDFPGGE
FPNQNPRVGEGLASWVKQDRSLEESDVVLWYVFGITHVPRLEDWPVMPVEHIGFMLQPHG
FFNCSPAVDVPPPRGCDLEIKDSDGSENGVAKPTPSSLMAKL

Transcript Sequence

Gene sequence data has not been registered.